Mapped reads for uncultivated Peribacteria bacterium UBA8895 genome r... - SRA

SRX3575515: Mapped reads for uncultivated Peribacteria bacterium UBA8895 genome recovered from ERX556027
1 ILLUMINA (Illumina HiSeq 2000) run: 60,287 spots, 11.6M bases, 5.8Mb downloads

Design: Reads from ERX556027 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA8895 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

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Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Peribacteria bacterium UBA8895 genome recovered from ERX556027

SAMN08019825 • SRS2845399 • All experiments • All runs

Organism: Candidatus Peribacteria bacterium

Library:

Name: UBA8895_library

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 60,287 spots, 11.6M bases, 5.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR6485872	60,287	11.6M	5.8Mb	2018-02-23

ID:: 4961017

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Sequence Read Archive

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